PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0047s0205.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family Trihelix
Protein Properties Length: 295aa    MW: 32984 Da    PI: 7.4985
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0047s0205.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix46.87.6e-1518108186
             trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 
                          +Wt++   +Liea  ++  +l+rg+l++++W++v++ +     + ++ +r+ +qCk++++ ++k+yk +k++ +  +    s++p++d+l
  Kaladp0047s0205.1.p  18 CWTEEASSTLIEAWGRRYLDLNRGNLRQKDWQQVADIVnarhgQTKKTHRTDVQCKNRIDTIKKKYKVEKARVSASAGMLASSWPFYDRL 107
                          7**************************************999999999***********************999998888889******9 PP

             trihelix  86 e 86 
                          +
  Kaladp0047s0205.1.p 108 D 108
                          8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138372.4E-2516110No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MTDSAAPSSR PVPVREDCWT EEASSTLIEA WGRRYLDLNR GNLRQKDWQQ VADIVNARHG  60
QTKKTHRTDV QCKNRIDTIK KKYKVEKARV SASAGMLASS WPFYDRLDEL IGSNSKRPAA  120
GGAGSAVSVS VSESLSHSPP MALPLPYPYR KSAPLATAVL PKKRASPMDD SYFRRNYSAV  180
AAAAAAAATA DEEEEDEDVR EEGEEEDDDF VQGFRGYEDS EDGIRKLARA IRKFGDVYEK  240
VEAEKQNQMI EMEKQRMQLA KDLEVQRMQM FVNMQLQLKK IKIAKGNKSN GEST*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007025374.11e-105Sequence-specific DNA binding transcription factors isoform 2
TrEMBLA0A061GEJ11e-105A0A061GEJ1_THECC; Sequence-specific DNA binding transcription factors isoform 2
STRINGPOPTR_0003s11850.11e-101(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.15e-61sequence-specific DNA binding transcription factors